RNA-Seq library | No. of RNA reads in each library | No. of variants (QUAL ≥ 999, DP ≥ 30, and GQ ≥ 40) | |||
---|---|---|---|---|---|
Homozygous alternate | Heterozygous | ||||
SNPs | INDELs | SNPs | INDELs | ||
INS_19 | 108,224 | 258 | 39 | 10 | 0 |
INS_23 | 283,192 | 620 | 135 | 26 | 0 |
INS_31 | 888,258 | 1357 | 280 | 34 | 2 |
INS_57 | 109,242 | 279 | 37 | 16 | 4 |