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Table 2 Genome assembly and annotation statistics of Ceratobasidium theobromae

From: Draft genome sequence of fastidious pathogen Ceratobasidium theobromae, which causes vascular-streak dieback in Theobroma cacao

 

C. theobromae

Total Contig length (bp)

33,899,105

Contig numbers

6878

BUSCO completeness (%)

99.1%

GC content

44.81%

N50 Contig length (bp)

70,517

Max Contig size (bp)

589,277

Min Contig size (bp)

200

Mean Contig size (bp)

4930

Gene number

9264

Total gene length (bp)

20,074,964

Average gene length (bp)

2168.07

Gene densitya

0.592

Number of expressed genesb

3550

Genes with GO annotationc

5364

Genes within KEGG pathway

3055

  1. aCDS bases/total genome bases
  2. bOnly gene models with ≥ 10 raw reads, detected in any of the infected plant samples
  3. cGene models with E < 10−5 for BLASTn against Uniport Gene Ontology database
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Fungal Biology and Biotechnology

ISSN: 2054-3085

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